Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCCAAAGGGAAGCGCTTTCTGTT&AGCATCTGCCCAAGCAACAAAGAGGAGGTGTTTGCTTGGGAGT
.((((..(((.(((((((((((.((&.)).))))))))))).))).)))).
Details
MiRNAhsa-miR-519d-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site110,153
Score0.846
Seed0
Au0.529
Energy-23.8
Binding len25
Me-10.063
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position5UTR
2D Structure