Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAAAGCGCTTCCCTTTGCTGGA&CAGGCCGCAAGAGAGCATCTGCCCAAGCAACAAAGAGGAGGTGTTTG
..(((((((((((((((((((.&.))).))))...)).)))))))))).
Details
MiRNAhsa-miR-518a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site97,144
Score0.846
Seed1
Au0.544
Energy-21.8
Binding len26
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure