Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATGCACCTGGGCAAGGATTCTG&GCCTGGTGTATT
(((((((.((((..........&))))))))))).
Details
MiRNAhsa-miR-500a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1569,1581
Score0.846
Seed1
Au0.618
Energy-15.8
Binding len12
Me-9.366
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure