Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCCTTTGTCCCTGGGTGAGA&TACCTGGTGACAGAGGAC
..(((((((((.(((((((...&))))))).))))))))).
Details
MiRNAhsa-miR-501-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site518,536
Score1.0
Seed1
Au0.603
Energy-22.5
Binding len18
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure