Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATGCACCCGGGCAAGGATTCT&AATGCTAATAAGCCTGGTGTATTA
((((((.((((((.........&.)))))))))))).
Details
MiRNAhsa-miR-501-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1558,1582
Score0.923
Seed0
Au0.632
Energy-17.1
Binding len14
Me-7.307
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure