Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTCTGGAGAGTGACAATCATG&ATGATGTACAGATTTTTTTTCAAGTTTTTATAGTTGCTTTATGCCAGAGTGG
((((((((((((((((.......&.))))))))...)))))))).
Details
MiRNAhsa-miR-514a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2683,2735
Score0.923
Seed1
Au0.691
Energy-18.9
Binding len21
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end1
Position3UTR
2D Structure