Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGCAAACATTTATTGTGTGC&TACAGTGAGTTGTTTGCTT
..(((((((((((((((((...&)))))))))).))))))).
Details
MiRNAhsa-miR-545-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2558,2577
Score0.846
Seed1
Au0.691
Energy-17.6
Binding len19
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure