Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCTAGTCCTGACTCAGCCAGT&CTGGTGACAGAGGACTGGTA
(((((((((...(((.((((.&)))))))...))))))))).
Details
MiRNAhsa-miR-554
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site521,541
Score1.0
Seed1
Au0.603
Energy-22.4
Binding len20
Me-11.585
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure