Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGTAAGCTGAACCTCTGAT&CAGAGTGGTTTACCCC
.((((((((((...(((((..&))))))))))))))).
Details
MiRNAhsa-miR-555
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2727,2743
Score0.846
Seed1
Au0.662
Energy-18.9
Binding len16
Me-9.286
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure