Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTCTTACTCCCTCAGGCACAT&GTGAAATGCTTGAAAAAGAAGAGGAAAGTGAACCTGAGGAAAAGAGTGAAGAA
..(((((((((((((((..(((&.)))..)))))))....)))))).)).
Details
MiRNAhsa-miR-550a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1838,1891
Score0.923
Seed1
Au0.632
Energy-19.7
Binding len27
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure