Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTTTTCTTTGAGACTCACT&GAGTTTTCGAAGAGAAA
..(((((((((((((((...&)))))).))))))))).
Details
MiRNAhsa-miR-627-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site812,829
Score0.846
Seed1
Au0.603
Energy-16.2
Binding len17
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure