Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTCATCCATAGTTGTCACTG&AGTGGCAACGACTTGGACATCTGAGCTG
((((((((((..(((((((((.&)))))))))....))))....)))))).
Details
MiRNAhsa-miR-549a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site56,84
Score0.846
Seed1
Au0.397
Energy-24.9
Binding len28
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end7
Position5UTR
2D Structure