Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTCATCCATAGTTGTCACTG&GATGACATGGATGAGG
..(((((((((.((((((....&))))))))))))))).
Details
MiRNAhsa-miR-549a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site448,464
Score0.846
Seed1
Au0.632
Energy-20.9
Binding len16
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure