Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTGACAGATTGATAACTGAAA&TCAGCATGCCAGACCTGAACTTTAATCAGTCTGCACAT
((((.(((((((((........&.))))))))))))).
Details
MiRNAhsa-miR-542-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2090,2128
Score0.923
Seed0
Au0.632
Energy-16.7
Binding len15
Me-9.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure