Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAAGCCCTGGAGGGGCTGGAG&TTCCAAGCCTTTTGGCTATGTTTGGGTCTTCTG
.(((((((((.((((((((((((&))))).))))))).)........))).))))).
Details
MiRNAhsa-miR-671-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site211,244
Score0.846
Seed1
Au0.632
Energy-22.5
Binding len33
Me-6.618
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure