Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGTGGGGCTTCGACCCTAACC&AGTGGTTTACCCCATTCA
((((((((....((((((....&)).))))..)))))))).
Details
MiRNAhsa-miR-1296-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2730,2748
Score1.0
Seed1
Au0.662
Energy-18.7
Binding len18
Me-12.408
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure