Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGCCTGCTATGTGCCAGGCA&GCCTGGTGTATTAAAACAGTTAATGGCAGCTGCTGAAGGGCACC
.(((((((((((..(((((((.&)))))))...............))))))..........))))).
Details
MiRNAhsa-miR-1271-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1569,1613
Score0.846
Seed1
Au0.574
Energy-24.1
Binding len44
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings37
Pairings in 3prime end7
PositionCDS
2D Structure