Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGACTTGGAGTCAGAAA&TTCTGACTTCTTTCAGTG
((((((...((((((((((.&)))))))))).)))))).
Details
MiRNAhsa-miR-378d
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1415,1433
Score0.923
Seed0
Au0.588
Energy-19.6
Binding len18
Me-8.851
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure