Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCAGAAGCAGGGAGGTTCTCCCA&GGAGACCTCCACTGGTCGATAATCCTAACTATCAGGGAATCTGG
..(((((.((((((((.(((((..&)))))))))).))).).......................)))).
Details
MiRNAhsa-miR-298
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1319,1363
Score0.923
Seed0
Au0.574
Energy-22.7
Binding len44
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end5
PositionCDS
2D Structure