Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGTGGGCACAGAATCTGGACT&TCAGATTCTTAATCCAGCAT
((.((((...(((((((((...&)))))))))...)))).)).
Details
MiRNAhsa-miR-541-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1236,1256
Score0.923
Seed0
Au0.5
Energy-17.9
Binding len20
Me-10.108
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure