Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCAGCGGGGTGTAGTGGATA&GTCTGCACATCCTGTTTCTA
.((.((((((((((.((((((.&)))))))))))))))).)).
Details
MiRNAhsa-miR-885-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2118,2138
Score1.0
Seed0
Au0.647
Energy-21.0
Binding len20
Me-7.561
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure