Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGAGACTGATGAGTTCCCGGGA&TCCCGAGAGGGATGTTTGGCATTGTAAAAATCAGCATGCCAGACCTGAACTTTAATCAGTCTGCA
(.((((((((((((((..(((.&.)))))))))..)))))))).).
Details
MiRNAhsa-miR-873-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2060,2125
Score0.846
Seed1
Au0.632
Energy-21.7
Binding len23
Me-5.101
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure