Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGAGCTGAGGCTCTGGGGGTG&CAAAGGAAGCCTCCTAGAGGATGTGGTTCCTCC
.(((((((((...((((((((((.&.))).)))))))....))))))))).
Details
MiRNAhsa-miR-939-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site951,984
Score0.923
Seed1
Au0.574
Energy-27.6
Binding len26
Me-11.254
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure