Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGACTGTTGCCGTCCTCCAG&GGAGGTGTTTGCTTGGGAGTTAAAAGCAAATGGCAACCAAAGCTCAGG
(((((((((((((((((((..&)))))........................))))))))...)).)))).
Details
MiRNAhsa-miR-943
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site133,181
Score0.923
Seed1
Au0.588
Energy-21.8
Binding len48
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure