Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGACTGTTGCCGTCCTCCAG&TGGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGA
((((((((((((((.(((((.&))))).))))......................))))).))))).
Details
MiRNAhsa-miR-943
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1218,1262
Score0.846
Seed1
Au0.485
Energy-20.0
Binding len44
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings39
Pairings in 3prime end6
PositionCDS
2D Structure