Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGTCTTGGGAGGGATGTGAC&TCCTATCAAACCTCCCAAAGAAATTGAAGATCCCA
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Details
MiRNAhsa-miR-1182
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site981,1016
Score0.923
Seed1
Au0.618
Energy-20.9
Binding len35
Me-5.101
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure