Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGTCTTGGGAGGGATGTGAC&ACTTTCCTCAGAGATTAAATATAAGACACCTCA
((((((((((.((((((.((...&)).))))))............)))))).)))).
Details
MiRNAhsa-miR-1182
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site336,369
Score0.846
Seed1
Au0.676
Energy-19.2
Binding len33
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings24
Pairings in 3prime end4
PositionCDS
2D Structure