Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGGCCAGGCGGTGG&CTGCTGGCTGGCTTGATG
((.(((((((.((((((&)))))).))))))).)).
Details
MiRNAhsa-miR-1227-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1136,1154
Score1.0
Seed0
Au0.618
Energy-21.8
Binding len18
Me-8.32
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure