Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGTGCCACCCTTTTCCCCAG&GGGGACCAAGTGGCAACGA
((((((((.....(((((..&)))))....)))))).)).
Details
MiRNAhsa-miR-1227-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site48,67
Score0.846
Seed1
Au0.426
Energy-21.2
Binding len19
Me-13.697
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure