Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGCGGGGGCAGGTGTGTG&CGCAAGAGAGCATCTGCCCAAGCAACA
((..((..((((((((((...&.))))))))))..)).)).
Details
MiRNAhsa-miR-1228-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site102,129
Score1.0
Seed0
Au0.5
Energy-23.7
Binding len19
Me-12.384
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure