Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCTCACCACTGCCCTCCCACAG&CTGATGACTGGAATGAAGACACGGATGGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGG
(.((((((((.(((((((.(((.&.))).)))..)))))))))))).).
Details
MiRNAhsa-miR-1229-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1193,1279
Score0.846
Seed1
Au0.574
Energy-26.2
Binding len25
Me-7.926
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure