Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGTCTGGGCGGACAGCTGC&AGCTGTCACTGCCGAAAACAGGCCGCA
((((((((((((((((((..&))))))).).))).....))))).)).
Details
MiRNAhsa-miR-1231
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site79,106
Score0.923
Seed1
Au0.456
Energy-21.2
Binding len27
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end6
Position5UTR
2D Structure