Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGTGGGAGCCCCAGTGTGTG&ACAGTTAATGGCAGCTGCTGAAGGGCACCCATGGCT
((..(((((.((((((((.(((.&.)))...))))..)))).))))).)).
Details
MiRNAhsa-miR-1238-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1584,1620
Score0.846
Seed0
Au0.529
Energy-21.3
Binding len27
Me-9.77
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure