Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGTGGGAGCCCCAGTGTGTG&GCCAGAGTGGTTTACCCCATTCACA
(((((((((((((.(..((.((.&))))..).))))...))))))))).
Details
MiRNAhsa-miR-1238-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2725,2750
Score0.923
Seed1
Au0.662
Energy-21.2
Binding len25
Me-5.027
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure