Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTCCTCGTCTGTCTGCCCC&GGGTCAGAGGATGAGA
....(((((((.(((((((.&))).))))))))))).
Details
MiRNAhsa-miR-1238-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1942,1958
Score0.923
Seed0
Au0.603
Energy-19.6
Binding len16
Me-12.893
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure