Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCTGAGCCATTCTGAGCCTC&GCCAGAGTGGTTTAC
....((((((((((((.((...&)))))))))))))).
Details
MiRNAhsa-miR-1200
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2725,2740
Score0.923
Seed0
Au0.676
Energy-19.2
Binding len15
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure