Details of Duplex


2D Structure dot-bracket from RNAduplex"
GATCTCACTTTGTTGCCCAGG&TCTGCCCAAGCAACAAAGAGGAGGTG
.(((((.(((((((((...((&.))...)))))))))..))))).
Details
MiRNAhsa-miR-1285-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site114,140
Score0.846
Seed0
Au0.515
Energy-19.0
Binding len23
Me-5.337
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure