Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCTAGCCACAGATGCAGTGAT&GCTGCAGATGGTTGGAGA
(((((((((....((((((...&))))))..))))))))).
Details
MiRNAhsa-miR-1287-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1522,1540
Score1.0
Seed1
Au0.603
Energy-21.9
Binding len18
Me-12.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure