Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTTCAACTCTAATGGGAGAGA&CTCCCAAAGAAATTGAAGAT
(((((((.(((..((((((...&)))))).)))..))))))).
Details
MiRNAhsa-miR-1305
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site992,1012
Score0.923
Seed1
Au0.588
Energy-15.6
Binding len20
Me-10.887
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure