Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGGAGGAGATGGGCCAAGTT&CCTATCAAACCTCCCA
....((((((.((((((.......&))))))...)))))).
Details
MiRNAhsa-miR-1249-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site982,998
Score0.846
Seed0
Au0.588
Energy-19.8
Binding len16
Me-12.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end1
PositionCDS
2D Structure