Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGAATGATGGGTTCTGACC&CAGAGTGGTTTACCCCATTCACA
.(((((((..((((...((((&.)))).))))))))))).
Details
MiRNAhsa-miR-1257
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2727,2750
Score0.846
Seed1
Au0.662
Energy-17.3
Binding len18
Me-7.061
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure