Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGCCTCCTCCTCTCCC&GGCCGCAAGAGAGCATCTGCCCAAGCAACAAAGAGGAGGTGT
.((((((((((((((..&.)))))...................))))))))).
Details
MiRNAhsa-miR-1281
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site99,141
Score0.923
Seed1
Au0.515
Energy-20.5
Binding len35
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure