Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCACCTCCCCTGCAAACGTCCA&GGTGTTTGCTTGGGAGT
....(((((..(((((((.((.&)))))))))..))))).
Details
MiRNAhsa-miR-1306-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site136,153
Score0.923
Seed0
Au0.529
Energy-22.1
Binding len17
Me-13.614
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure