Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCCCGGGCTGCTGCTGTTCCT&AGGAAGTAGCAGATCACTGGGCTGC
((((((((....(((((((((((&))))).))))))....)))))))).
Details
MiRNAhsa-miR-1538
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1502,1527
Score0.846
Seed1
Au0.574
Energy-29.3
Binding len25
Me-12.408
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure