Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCCCGGGCTGCTGCTGTTCCT&AATGGCAGCTGCTGAAGGGCA
..((((.(((.(((((((((...&))))))))).)))...)))).
Details
MiRNAhsa-miR-1538
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1590,1611
Score1.0
Seed0
Au0.574
Energy-24.1
Binding len21
Me-9.325
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure