Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCTGCGCGTCCCAGATGCCC&GGATCTGGAGATGGGCCGA
..(.((.((((((((((.((.&)))))))).)))).)).).
Details
MiRNAhsa-miR-1539
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1981,2000
Score0.846
Seed0
Au0.529
Energy-20.9
Binding len19
Me-9.533
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure