Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGCAGGGGCCGGGTGCTCACCG&GAGCATCTGCCCAAGCA
.((..(((.(((((((((....&))))))))))))..)).
Details
MiRNAhsa-miR-1909-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site109,126
Score1.0
Seed0
Au0.471
Energy-24.9
Binding len17
Me-12.001
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
Position5UTR
2D Structure