Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGCAGGGGCCGGGTGCTCACCG&TGAAGGGCACCCATGGCTTTGGTTGATTTATCTTGTGA
((((((((((((((((((..((&))..))))))))..)))).............)))))).
Details
MiRNAhsa-miR-1909-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1602,1640
Score0.923
Seed1
Au0.559
Energy-23.8
Binding len38
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end6
PositionCDS
2D Structure