Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCCCATGCCAAGAACTCCC&GGGAGTTAAAAGCAAATGGCAACCAAAGCTCAGGACTGGGAGA
.(((((((((((..(((((((&))))))).........)))))...............)))))).
Details
MiRNAhsa-miR-2116-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site147,190
Score0.846
Seed1
Au0.603
Energy-23.1
Binding len43
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings36
Pairings in 3prime end7
Position5UTR
2D Structure