Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCAGTGACTGTTCAGACGTC&GACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
..(((((((((.(((((((.(((&.))).))))))).))))))))).
Details
MiRNAhsa-miR-2682-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site43,93
Score0.904
Seed1
Au0.441
Energy-32.2
Binding len23
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure